
| Course Code | : MİK668 |
| Course Type | : Area Elective |
| Couse Group | : Third Cycle (Doctorate Degree) |
| Education Language | : Turkish |
| Work Placement | : N/A |
| Theory | : 2 |
| Prt. | : 2 |
| Credit | : 3 |
| Lab | : 0 |
| ECTS | : 4 |
The objective of this course is to give information about the metagenomic analysis of microbiome
It is necessary to learn and practice whole laboratory steps of microbiome analysis, to be able to transfer the knowledge on microbiota and microbiome to the field and clinical application. Fort his reason, this course contains the main methods used in the laboratory analysis of microbiota and microbiome; laboratory steps of microbiome analysis by new generation sequencing; determination of target genes, library construction; wet lab steps on the basis of different NGS systems; use of bioinformatic tools and databases; bioinformatic analysis, filtering and quality control of data; sampling and proceesing of microbiome material; statistical analysis and presentation of microbiome data.