Information Package / Course Catalogue
Epigenetics
Course Code: MBTK541
Course Type: Area Elective
Couse Group: Second Cycle (Master's Degree)
Education Language: Turkish
Work Placement: N/A
Theory: 3
Prt.: 0
Credit: 3
Lab: 0
ECTS: 8
Objectives of the Course

The aim of the course is to teach the epigenetic mechanisms and their relation to gene expression regulation. In particular, the role of epigenetic controls in normal development and cell differentiation will be emphasized. It will also show how epigenetic disorders lead to human pathologies.

Course Content

Brief Description: Topics that cover the functions of epigenetic mechanisms in gene regulation in mammals will be studied extensively. As content; DNA methylation, histone modifications, chromatin modeling, genomic imprinting, X-inactivation, role of epigenetics in cancer formation and miRNAs, epigenetic laboratory and computational analyzes, epigenetic reprogramming of stem cells and epigenetic controls have functions in development and immunocyte. It will also focus on the role of epigenetic control deficits in the emergence of diseases.

Name of Lecturer(s)
Learning Outcomes
1.Basic mechanisms of epigenetics, gene regulation
2.Epigenetic anomalies
3.Role of epigenetics in cancer
4.Epigenetic research methods
5.Epigenetics of complex diseases
Recommended or Required Reading
1.1. Epigenetics, C. David Allis, Thomas Jenuwein, Danny Reinberg, Marie-Laure Caparros. Cold Spring Harbour Laboratory Press, New York, 2007
2.2. Epigenetics and Chromatin (Progress in MolecularAndSubcellularBiology).PhilippeJeanteur (Editor), SpringerPress, New York, 2008
3.3. Peter A. Jones & Stephen B. Baylin. The Fundamental Role of Epigenetic Events in Cancer.Nature Reviews Genetics 3, 415-428 (June 2002).
4.4. DNA Methylation Patterns and Epigenetic Memory. Genes & Dev. 2002. 16: 6-21
Weekly Detailed Course Contents
Week 1 - Theoretical
Introduction to epigenetics
Week 2 - Theoretical
Epigenetic mechanisms and gene regulation I: Methylation
Week 3 - Theoretical
Epigenetic mechanisms and gene regulation II: Histons and Chromatin Remodelling
Week 4 - Theoretical
Epigenetic reprogramming in mammalian developmental biology
Week 5 - Theoretical
Stem Cells and epigenetics
Week 6 - Theoretical
Genomic imprinting and X-inactivation
Week 7 - Theoretical
Imprinting anomalies related diseases
Week 8 - Theoretical
Topic repetition (Midterm Exam)
Week 9 - Theoretical
DNA methylation and cancer; miRNAs
Week 10 - Theoretical
Epigenetic Methods: Molecular laboratory based methods
Week 11 - Theoretical
Epigenetic regulation of immune cells
Week 12 - Theoretical
Epigenetic epidemiology in complex diseases
Week 13 - Theoretical
Epigenetics of Prions: the role of environmental elements in acquired diseases
Week 14 - Theoretical
Student presentation
Assessment Methods and Criteria
Type of AssessmentCountPercent
Assignment1%5
Quiz2%5
Midterm Examination1%20
Final Examination1%70
Workload Calculation
ActivitiesCountPreparationTimeTotal Work Load (hours)
Lecture - Theory1473140
Assignment120121
Quiz2408
Midterm Examination114115
Final Examination114115
TOTAL WORKLOAD (hours)199
Contribution of Learning Outcomes to Programme Outcomes
PÇ-1
PÇ-2
PÇ-3
PÇ-4
PÇ-5
PÇ-6
PÇ-7
PÇ-8
PÇ-9
PÇ-10
PÇ-11
PÇ-12
PÇ-13
OÇ-1
5
5
5
5
5
5
5
5
5
5
5
5
5
OÇ-2
5
5
5
5
5
5
5
5
5
5
5
5
5
OÇ-3
5
5
4
4
4
4
4
4
4
4
4
4
4
OÇ-4
3
3
3
3
3
3
3
3
3
3
3
3
3
OÇ-5
5
5
4
5
4
4
4
4
4
4
4
4
4
Adnan Menderes University - Information Package / Course Catalogue
2026